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  • Top cofit genes for GFF4197 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4109 Aspartate aminotransferase (EC 2.6.1.1) no 0.58
    2 GFF6330 BUG/TctC family periplasmic protein no 0.55
    3 GFF6997 Flagellar basal-body rod protein FlgC no 0.54
    4 GFF7215 Transcriptional regulator, LysR family no 0.53
    5 GFF6569 no description no 0.53
    6 GFF6701 Regulatory protein, RpfE type no 0.52
    7 GFF2100 no description no 0.51
    8 GFF50 Murein hydrolase activator NlpD no 0.51
    9 GFF3085 no description no 0.51
    10 GFF3409 Probable lipoprotein signal peptide no 0.50
    11 GFF6483 Serine esterase no 0.49
    12 GFF4788 Uncharacterized protein COG3236 no 0.49
    13 GFF536 no description no 0.48
    14 GFF6580 CopG domain-containing protein no 0.48
    15 GFF3903 Similar to citrate lyase beta chain, 10 no 0.47
    16 GFF598 no description no 0.47
    17 GFF2823 Hemin transport protein HmuS no 0.46
    18 GFF1690 KEGG: DNA-binding protein H-NS no 0.46
    19 GFF1472 Tricarboxylate transport protein TctC no 0.46
    20 GFF3597 TRAP-type C4-dicarboxylate transport system, small permease component no 0.46

    Or look for negative cofitness