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  • Top cofit genes for PS417_21480 from Pseudomonas simiae WCS417

    23S rRNA pseudouridylate synthase
    SEED: Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase C

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_20930 50S rRNA methyltransferase 0.87 0.45
    2 PS417_26760 oxidase 0.84 0.44
    3 PS417_03260 5S ribosomal RNA no 0.44
    4 PS417_23915 pantoate--beta-alanine ligase 0.69 0.43
    5 PS417_24500 DEAD/DEAH box helicase 0.61 0.39
    6 PS417_19955 hypothetical protein 0.42 0.39
    7 PS417_19790 ATP synthase 0.86 0.39
    8 PS417_16555 cupin 0.83 0.37
    9 PS417_19350 GTP cyclohydrolase no 0.37
    10 PS417_19725 flagellar biosynthesis protein FlhB 0.79 0.37
    11 PS417_19695 flagellar biosynthesis sigma factor 0.86 0.36
    12 PS417_19885 flagellar basal body rod protein FlgG 0.89 0.36
    13 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA 0.42 0.36
    14 PS417_19880 flagellar basal body L-ring protein 0.89 0.36
    15 PS417_26370 RNA helicase 0.43 0.36
    16 PS417_21565 flagellar basal body rod protein FlgC 0.82 0.36
    17 PS417_02975 3-dehydroquinate dehydratase 0.57 0.36
    18 PS417_19730 flagellar biosynthesis protein FliR 0.77 0.36
    19 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 0.29 0.35
    20 PS417_19745 flagellar assembly protein FliO no 0.35

    Or look for negative cofitness