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  • Top cofit genes for PS417_21475 from Pseudomonas simiae WCS417

    HAD family hydrolase
    SEED: Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C
    KEGG: phosphoglycolate phosphatase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22350 Fis family transcriptional regulator 0.35 0.26
    2 PS417_03430 methyltransferase type 11 no 0.22
    3 PS417_01530 hypothetical protein no 0.20
    4 PS417_22355 glycine cleavage system protein H 0.40 0.19
    5 PS417_22360 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.51 0.19
    6 PS417_18435 hypothetical protein no 0.18
    7 PS417_25325 mechanosensitive ion channel protein no 0.18
    8 PS417_11730 PvdJ/PvdD/PvdP-like protein no 0.17
    9 PS417_00080 potassium transporter peripheral membrane component 0.40 0.17
    10 PS417_03825 laccase 0.61 0.17
    11 PS417_03955 hydrolase TatD no 0.16
    12 PS417_07385 2-hydroxyacid dehydrogenase no 0.16
    13 PS417_20385 hypothetical protein no 0.16
    14 PS417_02030 3-oxoacyl-ACP synthase 0.24 0.16
    15 PS417_18795 LysR family transcriptional regulator no 0.16
    16 PS417_16985 membrane protein no 0.16
    17 PS417_01140 taurine ABC transporter permease no 0.16
    18 PS417_02650 FAD-dependent oxidoreductase no 0.16
    19 PS417_13735 hypothetical protein no 0.16
    20 PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) no 0.15

    Or look for negative cofitness