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  • Top cofit genes for PS417_21470 from Pseudomonas simiae WCS417

    peptidase S49
    SEED: Periplasmic serine proteases (ClpP class)
    KEGG: protease IV

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21045 cysteine synthase no 0.39
    2 PS417_13425 cupin 0.72 0.36
    3 PS417_06365 RNA polymerase sigma factor 0.30 0.35
    4 PS417_21040 sulfurylase no 0.35
    5 PS417_04995 glutathione S-transferase no 0.35
    6 PS417_17515 GfdT protein no 0.34
    7 PS417_21050 serine acetyltransferase no 0.33
    8 PS417_20955 secretion protein no 0.31
    9 PS417_22230 class I peptide chain release factor no 0.31
    10 PS417_03070 LuxR family transcriptional regulator 0.34 0.31
    11 PS417_00620 GntR family transcriptional regulator no 0.31
    12 PS417_09690 sugar dehydrogenase no 0.31
    13 PS417_27605 hypothetical protein 0.35 0.30
    14 PS417_27475 membrane protein 0.60 0.29
    15 PS417_11170 aldehyde dehydrogenase no 0.29
    16 PS417_28535 TonB-dependent receptor no 0.28
    17 PS417_12475 hypothetical protein no 0.28
    18 PS417_05035 hypothetical protein no 0.28
    19 PS417_15565 transketolase no 0.28
    20 PS417_12610 RNA polymerase sigma factor no 0.28

    Or look for negative cofitness