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  • Top cofit genes for GFF4191 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.56
    2 GFF6449 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) no 0.50
    3 GFF48 DNA double-strand break repair protein Mre11 no 0.47
    4 GFF6081 Peptidase S1 and S6, chymotrypsin/Hap no 0.46
    5 GFF4919 hypothetical protein no 0.45
    6 GFF5377 Transcriptional regulator, AcrR family no 0.45
    7 GFF1781 Two-component transcriptional response regulator, LuxR family no 0.45
    8 GFF5014 Acyl-CoA dehydrogenase no 0.45
    9 GFF3084 no description no 0.44
    10 GFF6984 RNA polymerase sigma factor for flagellar operon no 0.44
    11 GFF768 Trehalose synthase (EC 5.4.99.16) no 0.44
    12 GFF3903 Similar to citrate lyase beta chain, 10 no 0.42
    13 GFF6800 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.42
    14 GFF3191 no description no 0.42
    15 GFF6622 Mobile element protein no 0.42
    16 GFF5401 2-keto-3-deoxy-L-fuconate dehydrogenase no 0.41
    17 GFF1242 hypothetical protein no 0.41
    18 GFF6139 Serine/threonine kinase no 0.41
    19 GFF6679 hypothetical protein no 0.39
    20 GFF7003 Flagellar basal-body rod protein FlgF no 0.39

    Or look for negative cofitness