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  • Top cofit genes for PS417_21405 from Pseudomonas simiae WCS417

    hydrolase TatD
    SEED: Putative deoxyribonuclease YcfH
    KEGG: TatD DNase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_09210 TetR family transcriptional regulator 0.55 0.22
    2 PS417_26375 membrane protein no 0.21
    3 PS417_15995 peptidase no 0.20
    4 PS417_00860 hypothetical protein 0.53 0.19
    5 PS417_17935 endoribonuclease L-PSP no 0.19
    6 PS417_14610 lysine transporter LysE no 0.19
    7 PS417_27335 flagellar basal body protein FliL no 0.18
    8 PS417_10030 hypothetical protein no 0.18
    9 PS417_23295 lysine transporter LysE 0.25 0.18
    10 PS417_18275 VacJ family lipoprotein no 0.18
    11 PS417_16975 GNAT family acetyltransferase no 0.18
    12 PS417_13950 LuxR family transcriptional regulator no 0.18
    13 PS417_28230 transcriptional regulator 0.38 0.18
    14 PS417_24950 hypothetical protein no 0.17
    15 PS417_15020 2-hydroxyacid dehydrogenase 0.64 0.17
    16 PS417_08600 LuxR family transcriptional regulator no 0.17
    17 PS417_08540 RNA helicase 0.73 0.17
    18 PS417_10390 RNA polymerase subunit sigma24 no 0.17
    19 PS417_07775 hypothetical protein no 0.17
    20 PS417_04230 lipoprotein no 0.17

    Or look for negative cofitness