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  • Top cofit genes for GFF4166 from Variovorax sp. SCN45

    Cytidine deaminase (EC 3.5.4.5)
    SEED: Cytidine deaminase (EC 3.5.4.5)
    KEGG: cytidine deaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4429 Inner membrane protein YpjD no 0.69
    2 GFF1874 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) no 0.63
    3 GFF3772 Arginase (EC 3.5.3.1) no 0.62
    4 GFF1682 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.61
    5 GFF1967 FAD linked oxidase-like no 0.60
    6 GFF1512 no description no 0.60
    7 GFF4292 no description no 0.57
    8 GFF5958 FIG00537018: hypothetical protein no 0.56
    9 GFF7253 Mobile element protein no 0.55
    10 GFF3956 no description no 0.55
    11 GFF5400 Demethylmenaquinone methyltransferase-like protein no 0.54
    12 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.54
    13 GFF4824 Transcriptional regulator, AraC family no 0.54
    14 GFF3007 hypothetical protein no 0.54
    15 GFF3249 Guanyl-specific ribonuclease (EC 3.1.27.3) no 0.53
    16 GFF4469 Cell division protein FtsA no 0.53
    17 GFF6323 Benzoate transport protein no 0.53
    18 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) 0.26 0.53
    19 GFF2058 hypothetical protein no 0.52
    20 GFF175 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.52

    Or look for negative cofitness