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  • Top cofit genes for PS417_21275 from Pseudomonas simiae WCS417

    GntR family transcriptional regulator
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_23730 LysR family transcriptional regulator 0.58 0.54
    2 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) 0.61 0.48
    3 PS417_17560 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) 0.61 0.46
    4 PS417_01180 ribosomal protein S6 modification protein 0.25 0.44
    5 PS417_12665 hypothetical protein 0.53 0.44
    6 PS417_13840 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.56 0.43
    7 PS417_20580 isocitrate dehydrogenase no 0.40
    8 PS417_25705 lipoate--protein ligase 0.55 0.39
    9 PS417_24680 murein transglycosylase 0.25 0.37
    10 PS417_19545 peptide synthase no 0.35
    11 PS417_27210 AsnC family transcriptional regulator 0.78 0.34
    12 PS417_10535 hypothetical protein no 0.33
    13 PS417_01185 ribosomal protein S6 modification protein 0.21 0.32
    14 PS417_27605 hypothetical protein no 0.32
    15 PS417_21040 sulfurylase no 0.31
    16 PS417_17625 ornithine monooxygenase no 0.30
    17 PS417_11695 peptide synthase no 0.30
    18 PS417_24265 ABC transporter ATP-binding protein 0.67 0.29
    19 PS417_15935 Rrf2 family transcriptional regulator 0.28 0.28
    20 PS417_13490 hypothetical protein no 0.27

    Or look for negative cofitness