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  • Top cofit genes for GFF4152 from Sphingobium sp. HT1-2

    Pyridoxal phosphate-containing protein YggS
    SEED: Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3320 Transcriptional regulator, AcrR family no 0.81
    2 GFF641 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) no 0.77
    3 GFF4047 RNA polymerase ECF-type sigma factor no 0.75
    4 GFF819 RNA binding S1 domain protein no 0.75
    5 GFF241 hypothetical protein no 0.75
    6 GFF277 hypothetical protein no 0.73
    7 GFF4190 [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme 0.61 0.72
    8 GFF3705 Flagellar hook-associated protein FlgK no 0.70
    9 GFF4106 PDZ domain family protein no 0.70
    10 GFF1570 putative phospholipid N-methyltransferase no 0.69
    11 GFF3483 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.68
    12 GFF3747 33 kDa chaperonin HslO no 0.68
    13 GFF2075 hypothetical protein 0.29 0.67
    14 GFF3731 Flagellum-specific ATP synthase FliI 0.44 0.67
    15 GFF366 NADH:ubiquinone oxidoreductase 17.2 kD subunit no 0.67
    16 GFF5034 hypothetical protein no 0.67
    17 GFF2832 Maltodextrin glucosidase (EC 3.2.1.20) no 0.66
    18 GFF1892 Nucleoside-diphosphate-sugar epimerase no 0.65
    19 GFF4504 Chaperone protein ClpB (ATP-dependent unfoldase) no 0.65
    20 GFF5077 hypothetical protein no 0.65

    Or look for negative cofitness