Top cofit genes for GFF4129 from Variovorax sp. SCN45

ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
KEGG: peptide/nickel transport system substrate-binding protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF178 Mannonate dehydratase (EC 4.2.1.8) no 0.67
2 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.67
3 GFF4635 Transketolase, N-terminal section (EC 2.2.1.1) no 0.63
4 GFF1004 Putative inner membrane protein YjeT (clustered with HflC) no 0.63
5 GFF6657 Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system no 0.63
6 GFF6006 BUG/TctC family periplasmic protein no 0.62
7 GFF6195 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.62
8 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA no 0.61
9 GFF619 Aspartate carbamoyltransferase (EC 2.1.3.2) no 0.61
10 GFF1515 Flagellar hook-length control protein FliK no 0.59
11 GFF3546 Chaperone protein HtpG 0.60 0.59
12 GFF1017 conserved hypothetical protein-transmembrane prediction no 0.59
13 GFF2608 Transcriptional regulator FrcR for fructose utilization, ROK family no 0.58
14 GFF6884 FIG00932717: hypothetical protein no 0.57
15 GFF399 3'-to-5' exoribonuclease RNase R no 0.57
16 GFF6571 Conjugative transfer protein TrbI no 0.57
17 GFF515 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.56
18 GFF3369 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis no 0.56
19 GFF4608 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17) no 0.56
20 GFF3277 Membrane protein insertion efficiency factor YidD no 0.56

Or look for negative cofitness