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  • Top cofit genes for PS417_21130 from Pseudomonas simiae WCS417

    nitrate reductase
    SEED: Hydantoin permease
    KEGG: nucleobase:cation symporter-1, NCS1 family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06365 RNA polymerase sigma factor no 0.47
    2 PS417_10720 chemotaxis protein CheY no 0.46
    3 PS417_16160 ABC transporter substrate-binding protein no 0.45
    4 PS417_16370 chemotaxis protein CheY 0.34 0.44
    5 PS417_13940 racemase no 0.43
    6 PS417_16070 TonB-dependent receptor 0.27 0.43
    7 PS417_06970 LysR family transcriptional regulator no 0.41
    8 PS417_12920 endoribonuclease no 0.41
    9 PS417_19560 amino acid ABC transporter substrate-binding protein 0.14 0.39
    10 PS417_28265 pyridoxamine kinase no 0.39
    11 PS417_13425 cupin no 0.38
    12 PS417_21040 sulfurylase no 0.37
    13 PS417_21050 serine acetyltransferase no 0.37
    14 PS417_12550 chemotaxis protein no 0.36
    15 PS417_24595 histidine kinase no 0.36
    16 PS417_09620 lipopolysaccharide biosynthesis protein no 0.36
    17 PS417_05070 serine/threonine protein kinase no 0.35
    18 PS417_03725 acyltransferase no 0.35
    19 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.35
    20 PS417_09635 mannose-1-phosphate guanylyltransferase no 0.34

    Or look for negative cofitness