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Cofit
Protein
Homologs
Top cofit genes for GFF4109 from
Hydrogenophaga sp. GW460-11-11-14-LB1
Cytochrome c551/c552
SEED: Cytochrome c551/c552
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2931
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
0.54
0.73
2
GFF2583
Ferric iron ABC transporter, permease protein
no
0.69
3
GFF1758
periplasmic sensor signal transduction histidine kinase
no
0.68
4
GFF2715
rRNA small subunit methyltransferase I
no
0.68
5
GFF2755
Excinuclease ABC subunit A
no
0.67
6
GFF4040
Cell division trigger factor (EC 5.2.1.8)
no
0.67
7
GFF5228
Transcriptional regulator, TetR family
no
0.66
8
GFF4856
HflK protein
no
0.66
9
GFF2210
Hydrogenase transcriptional regulatory protein HoxA
no
0.65
10
GFF1683
Protein involved in catabolism of external DNA
no
0.65
11
GFF1916
Probable transmembrane protein
no
0.64
12
GFF3339
RNA polymerase sigma factor RpoE
no
0.64
13
GFF4043
ATP-dependent Clp protease ATP-binding subunit ClpX
no
0.64
14
GFF24
Hydroxymethylpyrimidine ABC transporter, transmembrane component
no
0.64
15
GFF2780
Pyruvate kinase (EC 2.7.1.40)
no
0.63
16
GFF4152
FIG050068: DNA-binding protein
no
0.63
17
GFF4892
Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-)
0.51
0.62
18
GFF5509
Gluconate utilization system Gnt-I transcriptional repressor
0.32
0.62
19
GFF3934
Aspartate aminotransferase (EC 2.6.1.1)
no
0.62
20
GFF2536
two-component hybrid sensor and regulator
no
0.61
Or look for
negative cofitness