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  • Top cofit genes for GFF4106 from Sphingobium sp. HT1-2

    PDZ domain family protein
    SEED: PDZ domain family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5034 hypothetical protein no 0.88
    2 GFF4190 [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme no 0.87
    3 GFF4047 RNA polymerase ECF-type sigma factor no 0.86
    4 GFF819 RNA binding S1 domain protein no 0.84
    5 GFF5293 Mobile element protein no 0.84
    6 GFF4046 anti-FecI sigma factor FecR no 0.84
    7 GFF3576 hypothetical protein no 0.84
    8 GFF2832 Maltodextrin glucosidase (EC 3.2.1.20) no 0.82
    9 GFF2595 hypothetical protein no 0.82
    10 GFF788 Phytoene desaturase (lycopene-forming) (EC 1.3.99.31) no 0.82
    11 GFF3694 Transcriptional regulator, LacI family no 0.82
    12 GFF636 hypothetical protein no 0.82
    13 GFF2791 Two-component system sensor histidine kinase no 0.82
    14 GFF750 Ribosomal silencing factor RsfA no 0.81
    15 GFF2254 DksA family protein PA5536 (no Zn-finger) no 0.81
    16 GFF366 NADH:ubiquinone oxidoreductase 17.2 kD subunit no 0.80
    17 GFF785 Ammonium transporter 0.71 0.80
    18 GFF776 RNA polymerase sigma-54 factor RpoN no 0.79
    19 GFF2286 ATP-dependent Clp protease ATP-binding subunit ClpA 0.54 0.79
    20 GFF4142 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) no 0.79

    Or look for negative cofitness