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Cofit
Protein
Homologs
Top cofit genes for GFF4106 from
Sphingobium sp. HT1-2
PDZ domain family protein
SEED: PDZ domain family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5034
hypothetical protein
no
0.88
2
GFF4190
[Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme
no
0.87
3
GFF4047
RNA polymerase ECF-type sigma factor
no
0.86
4
GFF819
RNA binding S1 domain protein
no
0.84
5
GFF5293
Mobile element protein
no
0.84
6
GFF4046
anti-FecI sigma factor FecR
no
0.84
7
GFF3576
hypothetical protein
no
0.84
8
GFF2832
Maltodextrin glucosidase (EC 3.2.1.20)
no
0.82
9
GFF2595
hypothetical protein
no
0.82
10
GFF788
Phytoene desaturase (lycopene-forming) (EC 1.3.99.31)
no
0.82
11
GFF3694
Transcriptional regulator, LacI family
no
0.82
12
GFF636
hypothetical protein
no
0.82
13
GFF2791
Two-component system sensor histidine kinase
no
0.82
14
GFF750
Ribosomal silencing factor RsfA
no
0.81
15
GFF2254
DksA family protein PA5536 (no Zn-finger)
no
0.81
16
GFF366
NADH:ubiquinone oxidoreductase 17.2 kD subunit
no
0.80
17
GFF785
Ammonium transporter
0.71
0.80
18
GFF776
RNA polymerase sigma-54 factor RpoN
no
0.79
19
GFF2286
ATP-dependent Clp protease ATP-binding subunit ClpA
0.54
0.79
20
GFF4142
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
no
0.79
Or look for
negative cofitness