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  • Top cofit genes for PS417_21030 from Pseudomonas simiae WCS417

    GntR family transcriptional regulator
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21035 multidrug transporter 0.74 0.60
    2 PS417_22500 porin 0.43 0.47
    3 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE no 0.42
    4 PS417_10965 chemotaxis protein no 0.41
    5 PS417_17435 dehydrogenase no 0.39
    6 PS417_09700 transaldolase no 0.39
    7 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein no 0.39
    8 PS417_17485 membrane protein no 0.38
    9 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC no 0.37
    10 PS417_02655 amino acid ABC transporter substrate-binding protein 0.32 0.36
    11 PS417_09725 transporter 0.43 0.36
    12 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF 0.33 0.36
    13 PS417_17495 multidrug ABC transporter permease no 0.36
    14 PS417_09710 dehydrogenase no 0.35
    15 PS417_09705 hypothetical protein 0.21 0.35
    16 PS417_21050 serine acetyltransferase no 0.35
    17 PS417_27010 threonine dehydratase no 0.35
    18 PS417_21040 sulfurylase no 0.33
    19 PS417_09720 methyltransferase no 0.33
    20 PS417_09695 hydrolase 0.17 0.33

    Or look for negative cofitness