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  • Top cofit genes for PS417_20955 from Pseudomonas simiae WCS417

    secretion protein
    SEED: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
    KEGG: type III secretion protein SctC

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06365 RNA polymerase sigma factor no 0.73
    2 PS417_21050 serine acetyltransferase no 0.66
    3 PS417_21040 sulfurylase no 0.64
    4 PS417_21045 cysteine synthase no 0.63
    5 PS417_13425 cupin no 0.62
    6 PS417_12610 RNA polymerase sigma factor no 0.59
    7 PS417_28265 pyridoxamine kinase no 0.56
    8 PS417_03070 LuxR family transcriptional regulator no 0.55
    9 PS417_16070 TonB-dependent receptor no 0.54
    10 PS417_21375 ADP-ribosylglycohydrolase no 0.54
    11 PS417_16370 chemotaxis protein CheY no 0.54
    12 PS417_16160 ABC transporter substrate-binding protein no 0.53
    13 PS417_27605 hypothetical protein no 0.52
    14 PS417_11170 aldehyde dehydrogenase no 0.52
    15 PS417_15570 excinuclease ABC subunit A no 0.51
    16 PS417_10720 chemotaxis protein CheY no 0.51
    17 PS417_06970 LysR family transcriptional regulator no 0.50
    18 PS417_23645 amino acid permease no 0.50
    19 PS417_24605 thiamine-phosphate pyrophosphorylase 0.24 0.49
    20 PS417_05975 chemotaxis protein CheW no 0.49

    Or look for negative cofitness