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  • Top cofit genes for PS417_20930 from Pseudomonas simiae WCS417

    50S rRNA methyltransferase
    SEED: 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)
    KEGG: ribosomal RNA large subunit methyltransferase L

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26760 oxidase 0.54 0.57
    2 PS417_26370 RNA helicase 0.28 0.57
    3 PS417_24500 DEAD/DEAH box helicase 0.39 0.55
    4 PS417_14945 beta-lactamase no 0.54
    5 PS417_02145 potassium transporter KefA 0.21 0.49
    6 PS417_14965 transcriptional regulator no 0.49
    7 PS417_04275 hypothetical protein no 0.47
    8 PS417_03260 5S ribosomal RNA no 0.46
    9 PS417_22535 ornithine acetyltransferase 0.66 0.46
    10 PS417_21480 23S rRNA pseudouridylate synthase 0.87 0.45
    11 PS417_04290 hypothetical protein 0.63 0.45
    12 PS417_19955 hypothetical protein 0.62 0.44
    13 PS417_14960 ATPase no 0.43
    14 PS417_02560 23S rRNA methyltransferase 0.75 0.41
    15 PS417_03005 arginine decarboxylase 0.82 0.40
    16 PS417_24335 50S rRNA methyltransferase 0.55 0.39
    17 PS417_18710 hypothetical protein no 0.39
    18 PS417_04475 hypothetical protein 0.23 0.38
    19 PS417_11705 cyclic peptide transporter 0.25 0.38
    20 PS417_08000 beta-hydroxylase 0.40 0.37

    Or look for negative cofitness