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  • Top cofit genes for GFF4076 from Sphingobium sp. HT1-2

    Two-component transcriptional response regulator, LuxR family
    SEED: DNA-binding response regulator
    KEGG: two-component system, OmpR family, response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3504 hypothetical protein no 0.78
    2 GFF2586 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) no 0.75
    3 GFF4688 L-alanine-DL-glutamate epimerase (EC 5.1.1.n1) 0.53 0.75
    4 GFF1484 Free methionine-(R)-sulfoxide reductase, contains GAF domain no 0.73
    5 GFF1766 Gene Transfer Agent host specificity protein no 0.72
    6 GFF4391 hypothetical protein no 0.71
    7 GFF31 Phage lysin (EC 3.2.1.17) # Phage lysozyme or muramidase (EC 3.2.1.17) no 0.71
    8 GFF104 Inner membrane protein no 0.70
    9 GFF894 oxidoreductase domain protein no 0.70
    10 GFF4243 hypothetical protein no 0.70
    11 GFF5062 Flavohemoglobin / Nitric oxide dioxygenase (EC 1.14.12.17) 0.17 0.69
    12 GFF1829 Exoenzymes regulatory protein AepA precursor no 0.68
    13 GFF393 hypothetical protein no 0.68
    14 GFF5388 hypothetical protein no 0.68
    15 GFF1757 Glutathione S-transferase (EC 2.5.1.18) no 0.67
    16 GFF1375 hypothetical protein no 0.67
    17 GFF1667 hypothetical protein no 0.67
    18 GFF855 Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site 0.30 0.67
    19 GFF1831 FIG027115: Membrane protein no 0.67
    20 GFF377 Protein-export protein SecB (maintains pre-export unfolded state) 0.39 0.66

    Or look for negative cofitness