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  • Top cofit genes for GFF4070 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF173 Hexuronate utilization operon transcriptional repressor ExuR no 0.63
    2 GFF473 Cytochrome c551/c552 no 0.58
    3 GFF2594 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.56
    4 GFF1959 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.54
    5 GFF7285 Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) no 0.54
    6 GFF3499 Toxin HigB / Protein kinase domain of HipA no 0.53
    7 GFF4670 Transcriptional regulator, AcrR family no 0.51
    8 GFF6174 Fluoride ion transporter CrcB no 0.51
    9 GFF6302 Transcriptional regulator, IclR family no 0.51
    10 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) no 0.50
    11 GFF1487 Tetrapartite efflux system component, FusD-like no 0.50
    12 GFF3505 hypothetical protein no 0.49
    13 GFF244 Cys regulon transcriptional activator CysB no 0.49
    14 GFF5096 similar to protocatechuate 4,5-dioxygenase beta chain no 0.49
    15 GFF2423 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) no 0.49
    16 GFF4701 Various polyols ABC transporter, permease protein 2 no 0.48
    17 GFF2368 ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) no 0.48
    18 GFF4873 no description no 0.48
    19 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.48
    20 GFF6832 DnaJ-class molecular chaperone CbpA no 0.48

    Or look for negative cofitness