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  • Top cofit genes for GFF4068 from Variovorax sp. SCN45

    Heavy metal sensor histidine kinase
    SEED: Heavy metal sensor histidine kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3828 hypothetical protein no 0.60
    2 GFF5987 Response regulator BaeR no 0.60
    3 GFF2182 Inner membrane component of TAM transport system no 0.60
    4 GFF3731 Glutathione S-transferase no 0.57
    5 GFF6683 Efflux ABC transporter, permease protein no 0.57
    6 GFF5118 gluconolactonase family protein no 0.57
    7 GFF4994 Acyl-CoA-binding protein no 0.56
    8 GFF6731 Nucleoside ABC transporter, permease protein 1 no 0.56
    9 GFF4485 FIG00715336: hypothetical protein no 0.56
    10 GFF3386 hypothetical protein no 0.56
    11 GFF2379 Serine/threonine protein kinase no 0.55
    12 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.54
    13 GFF3825 Autolysin sensor kinase (EC 2.7.3.-) no 0.54
    14 GFF2183 Outer membrane component of TAM transport system no 0.54
    15 GFF4279 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-) no 0.54
    16 GFF2634 FIG00464095: hypothetical protein no 0.54
    17 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) no 0.53
    18 GFF2151 twitching motility protein PilG no 0.53
    19 GFF5416 Type IV fimbrial biogenesis protein PilW no 0.53
    20 GFF2510 Type IV fimbrial assembly, ATPase PilB no 0.52

    Or look for negative cofitness