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  • Top cofit genes for GFF4060 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6715 Transcriptional regulator of RpiR family in catabolic operon no 0.66
    2 GFF663 Transcriptional regulator, Crp/Fnr family no 0.59
    3 GFF7291 Magnesium and cobalt transport protein CorA no 0.58
    4 GFF2822 Periplasmic hemin-binding protein no 0.58
    5 GFF741 Transcriptional regulator, LysR family no 0.56
    6 GFF3960 3'-to-5' oligoribonuclease (orn) no 0.55
    7 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.54
    8 GFF412 Transcription-repair coupling factor no 0.54
    9 GFF4576 BUG/TctC family periplasmic protein no 0.54
    10 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) no 0.54
    11 GFF5831 Ketosteroid isomerase-related protein no 0.53
    12 GFF992 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) no 0.53
    13 GFF4791 RNA polymerase ECF-type sigma factor no 0.53
    14 GFF797 no description no 0.53
    15 GFF399 3'-to-5' exoribonuclease RNase R no 0.52
    16 GFF1151 Nitrogen regulatory protein P-II no 0.52
    17 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.52
    18 GFF3320 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) no 0.52
    19 GFF3782 hypothetical protein no 0.51
    20 GFF5541 Transcriptional regulator, GntR family no 0.51

    Or look for negative cofitness