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  • Top cofit genes for GFF406 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3588 ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) no 0.61
    2 GFF6722 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.58
    3 GFF2650 hypothetical protein no 0.58
    4 GFF1312 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.57
    5 GFF4970 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.57
    6 GFF417 Aspartate aminotransferase (AspB-4) (EC 2.6.1.1) no 0.56
    7 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.56
    8 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.55
    9 GFF3090 Colicin V production protein no 0.54
    10 GFF867 Oxidoreductase, GMC family no 0.54
    11 GFF1865 Transcriptional regulator, AraC family no 0.54
    12 GFF7241 no description no 0.53
    13 GFF3514 no description no 0.52
    14 GFF5828 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.52
    15 GFF5958 FIG00537018: hypothetical protein no 0.52
    16 GFF7300 Biopolymer transport protein ExbD/TolR no 0.51
    17 GFF4414 Conjugative transfer protein TrbB no 0.51
    18 GFF7086 Transcriptional regulator, IclR family no 0.50
    19 GFF1576 2-pyrone-4,6-dicarboxylic acid hydrolase (EC 3.1.1.57) no 0.50
    20 GFF4094 no description no 0.50

    Or look for negative cofitness