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  • Top cofit genes for PS417_20785 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Fumarate and nitrate reduction regulatory protein
    KEGG: CRP/FNR family transcriptional regulator, anaerobic regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_20700 cbb3-type cytochrome c oxidase subunit I 0.73 0.68
    2 PS417_25315 membrane protein 0.98 0.61
    3 PS417_20705 cbb3-type cytochrome c oxidase subunit II 0.55 0.48
    4 PS417_27075 thiol-disulfide isomerase 0.43 0.45
    5 PS417_20755 membrane protein 0.52 0.40
    6 PS417_26370 RNA helicase no 0.39
    7 PS417_25645 peptidase M23 no 0.38
    8 PS417_04290 hypothetical protein 0.90 0.37
    9 PS417_18545 cell division protein 0.50 0.37
    10 PS417_03015 hypothetical protein 0.54 0.37
    11 PS417_20930 50S rRNA methyltransferase 0.30 0.36
    12 PS417_21575 chemotaxis protein 0.71 0.34
    13 PS417_25390 MFS transporter 0.66 0.33
    14 PS417_04475 hypothetical protein no 0.33
    15 PS417_20650 hypothetical protein no 0.33
    16 PS417_20715 cytochrome Cbb3 0.70 0.32
    17 PS417_19650 chemotaxis protein CheW 0.30 0.32
    18 PS417_17125 transcriptional regulator no 0.32
    19 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase no 0.32
    20 PS417_08945 heat shock protein 90 0.45 0.32

    Or look for negative cofitness