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  • Top cofit genes for GFF4048 from Variovorax sp. SCN45

    Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC
    SEED: Heavy metal RND efflux outer membrane protein, CzcC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2120 Type IV fimbrial biogenesis protein PilX no 0.57
    2 GFF4265 hypothetical protein no 0.56
    3 GFF6370 T6SS component Hcp no 0.53
    4 GFF738 T6SS PAAR-repeat protein no 0.51
    5 GFF2405 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.51
    6 GFF3437 putative membrane protein no 0.50
    7 GFF3003 Cobalt-containing nitrile hydratase subunit alpha (EC 4.2.1.84) no 0.50
    8 GFF1948 Phage integrase no 0.50
    9 GFF1090 Phosphohistidine phosphatase SixA no 0.49
    10 GFF1614 Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1) no 0.49
    11 GFF1085 no description no 0.48
    12 GFF2711 hypothetical protein no 0.48
    13 GFF2212 KEGG: prepilin peptidase CpaA no 0.48
    14 GFF646 no description no 0.47
    15 GFF6366 T6SS component TssG (ImpH/VasB) no 0.47
    16 GFF5245 FIG00771430: hypothetical protein no 0.46
    17 GFF5991 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.46
    18 GFF6455 Bll3817 protein no 0.46
    19 GFF6479 hypothetical protein no 0.46
    20 GFF4671 putative membrane protein no 0.45

    Or look for negative cofitness