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  • Top cofit genes for GFF4046 from Sphingobium sp. HT1-2

    anti-FecI sigma factor FecR
    SEED: regulatory protein PupR, putative

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2595 hypothetical protein no 0.93
    2 GFF2791 Two-component system sensor histidine kinase no 0.91
    3 GFF3758 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) no 0.89
    4 GFF784 Nitrogen regulatory protein P-II, GlnK no 0.89
    5 GFF776 RNA polymerase sigma-54 factor RpoN no 0.88
    6 GFF3483 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) 0.37 0.88
    7 GFF1660 NADP-dependent malic enzyme (EC 1.1.1.40) no 0.88
    8 GFF1148 Nitrogen regulation protein NR(I), GlnG (=NtrC) 0.68 0.88
    9 GFF2594 Efflux ABC transporter, permease/ATP-binding protein no 0.88
    10 GFF1937 hypothetical protein no 0.87
    11 GFF2007 Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated 0.71 0.87
    12 GFF785 Ammonium transporter no 0.87
    13 GFF1149 Nitrogen regulation protein NtrB (EC 2.7.13.3) no 0.87
    14 GFF1715 hypothetical protein no 0.86
    15 GFF1902 N-acetylglutamate kinase (EC 2.7.2.8) no 0.86
    16 GFF2286 ATP-dependent Clp protease ATP-binding subunit ClpA no 0.86
    17 GFF3047 Two-component oxygen-sensor histidine kinase FixL no 0.84
    18 GFF2283 Quinone oxidoreductase (EC 1.6.5.5) no 0.83
    19 GFF147 ATP-dependent hsl protease ATP-binding subunit HslU no 0.82
    20 GFF4142 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) no 0.82

    Or look for negative cofitness