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Cofit
Protein
Homologs
Top cofit genes for GFF404 from
Variovorax sp. SCN45
Hydrolase, alpha/beta fold family
SEED: probable hydrolase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3913
Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
no
0.58
2
GFF2576
6-carboxy-5,6,7,8-tetrahydropterin synthase (EC 4.1.2.50)
no
0.49
3
GFF5214
7-cyano-7-deazaguanine synthase (EC 6.3.4.20)
no
0.48
4
GFF5671
FIG01964566: Predicted membrane protein, hemolysin III homolog
no
0.48
5
GFF3915
Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
no
0.47
6
GFF3266
Putative transmembrane protein
0.34
0.46
7
GFF5153
Putative ROK-family transcriptional regulator
no
0.44
8
GFF4279
3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-)
no
0.43
9
GFF5279
Fructokinase (EC 2.7.1.4)
no
0.43
10
GFF6293
Periplasmic thiol:disulfide interchange protein DsbA
no
0.43
11
GFF3268
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.42
12
GFF6086
Putative short-chain dehydrogenase
no
0.42
13
GFF1861
Transcriptional regulator, IclR family
no
0.42
14
GFF3820
Efflux transport system, outer membrane factor (OMF) lipoprotein
no
0.42
15
GFF3790
Formyltetrahydrofolate deformylase (EC 3.5.1.10)
no
0.42
16
GFF6422
Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17)
0.73
0.41
17
GFF2284
FIG00538168: hypothetical protein
no
0.41
18
GFF6089
1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18)
no
0.41
19
GFF3686
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
no
0.41
20
GFF2792
Chaperone protein ClpB (ATP-dependent unfoldase)
no
0.40
Or look for
negative cofitness