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  • Top cofit genes for GFF4038 from Variovorax sp. SCN45

    Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family
    SEED: Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5115 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE no 0.68
    2 GFF1418 Transcriptional regulator, LysR family no 0.66
    3 GFF3506 Superoxide dismutase [Fe] (EC 1.15.1.1) no 0.62
    4 GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) no 0.61
    5 GFF2136 Ribokinase (EC 2.7.1.15) no 0.61
    6 GFF3127 no description no 0.59
    7 GFF3842 Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) no 0.59
    8 GFF17 hypothetical protein no 0.58
    9 GFF3705 Amidases related to nicotinamidase no 0.57
    10 GFF1589 FIG00765372: hypothetical protein no 0.56
    11 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 no 0.56
    12 GFF888 BUG/TctC family periplasmic protein no 0.56
    13 GFF2923 Tripartite tricarboxylate transporter TctC family no 0.56
    14 GFF4945 probable GntR-family transcriptional regulator no 0.55
    15 GFF627 Secretion protein HlyD no 0.54
    16 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) no 0.54
    17 GFF4719 hypothetical protein no 0.54
    18 GFF1239 Two-component system sensor histidine kinase no 0.54
    19 GFF440 CobN-like chelatase BtuS for metalloporphyrine salvage 0.94 0.54
    20 GFF5984 L-lactate dehydrogenase no 0.54

    Or look for negative cofitness