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  • Top cofit genes for GFF4030 from Variovorax sp. SCN45

    Transcriptional regulator, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7133 Catalase-like heme-binding protein no 0.51
    2 GFF1528 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB no 0.49
    3 GFF3596 TRAP-type C4-dicarboxylate transport system, large permease component no 0.49
    4 GFF3587 KEGG: putative spermidine/putrescine transport system ATP-binding protein no 0.47
    5 GFF6442 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.46
    6 GFF1849 FIG00347667: hypothetical protein no 0.46
    7 GFF1687 BUG/TctC family periplasmic protein no 0.46
    8 GFF4060 hypothetical protein no 0.46
    9 GFF4066 Putative type II restriction enzyme NmeDIP (EC 3.1.21.4) (Endonuclease NmeDIP) (R.NmeDIP) no 0.46
    10 GFF2065 Peptidase, M23/M37 family no 0.46
    11 GFF5355 no description no 0.45
    12 GFF2822 Periplasmic hemin-binding protein no 0.45
    13 GFF3376 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.44
    14 GFF7415 no description no 0.44
    15 GFF2119 Type IV fimbrial biogenesis protein PilW no 0.44
    16 GFF6572 Conjugative transfer protein TrbG no 0.44
    17 GFF1998 Two-component system sensor histidine kinase no 0.43
    18 GFF3199 Ser/Thr protein phosphatase family protein no 0.43
    19 GFF6221 T6SS associated component TagF (ImpM) no 0.43
    20 GFF1955 hypothetical protein no 0.43

    Or look for negative cofitness