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Gene
Fitness
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Cofit
Protein
Homologs
Top cofit genes for GFF4030 from
Variovorax sp. SCN45
Transcriptional regulator, MerR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7133
Catalase-like heme-binding protein
no
0.51
2
GFF1528
Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB
no
0.49
3
GFF3596
TRAP-type C4-dicarboxylate transport system, large permease component
no
0.49
4
GFF3587
KEGG: putative spermidine/putrescine transport system ATP-binding protein
no
0.47
5
GFF6442
Aldehyde dehydrogenase (EC 1.2.1.3)
no
0.46
6
GFF1849
FIG00347667: hypothetical protein
no
0.46
7
GFF1687
BUG/TctC family periplasmic protein
no
0.46
8
GFF4060
hypothetical protein
no
0.46
9
GFF4066
Putative type II restriction enzyme NmeDIP (EC 3.1.21.4) (Endonuclease NmeDIP) (R.NmeDIP)
no
0.46
10
GFF2065
Peptidase, M23/M37 family
no
0.46
11
GFF5355
no description
no
0.45
12
GFF2822
Periplasmic hemin-binding protein
no
0.45
13
GFF3376
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.44
14
GFF7415
no description
no
0.44
15
GFF2119
Type IV fimbrial biogenesis protein PilW
no
0.44
16
GFF6572
Conjugative transfer protein TrbG
no
0.44
17
GFF1998
Two-component system sensor histidine kinase
no
0.43
18
GFF3199
Ser/Thr protein phosphatase family protein
no
0.43
19
GFF6221
T6SS associated component TagF (ImpM)
no
0.43
20
GFF1955
hypothetical protein
no
0.43
Or look for
negative cofitness