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  • Top cofit genes for GFF4029 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Flagellar biosynthesis protein FliC
    SEED: Flagellar biosynthesis protein FliC
    KEGG: flagellin

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3363 Flagellar hook-associated protein FlgK 0.58 0.89
    2 GFF4028 Flagellar hook-associated protein FliD 0.97 0.85
    3 GFF2341 UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide no 0.82
    4 GFF3353 Flagellar basal-body P-ring formation protein FlgA no 0.78
    5 GFF1059 ABC transporter, ATP-binding protein no 0.77
    6 GFF4906 Virulence factor VirK no 0.75
    7 GFF103 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) no 0.74
    8 GFF4352 Cell division trigger factor (EC 5.2.1.8) 0.32 0.74
    9 GFF1710 Kup system potassium uptake protein no 0.73
    10 GFF2455 Putative sensory histidine kinase YfhA 0.66 0.73
    11 GFF1690 RNA polymerase sigma factor for flagellar operon 0.94 0.72
    12 GFF4011 Flagellar motor switch protein FliM 0.88 0.72
    13 GFF2456 putative alpha helix protein no 0.72
    14 GFF2308 Glycerol uptake facilitator protein 0.48 0.72
    15 GFF4006 Flagellar biosynthesis protein FliR 0.91 0.71
    16 GFF3354 Flagellar basal-body rod protein FlgB 0.93 0.71
    17 GFF3052 Transcriptional regulator, IclR family no 0.71
    18 GFF4158 tmRNA-binding protein SmpB no 0.71
    19 GFF3883 Colanic acid biosysnthesis protein WcaK no 0.71
    20 GFF3567 Pyruvate kinase (EC 2.7.1.40) no 0.71

    Or look for negative cofitness