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  • Top cofit genes for GFF4025 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Cytoplasmic alpha-amylase (EC 3.2.1.1)
    SEED: Cytoplasmic alpha-amylase (EC 3.2.1.1)
    KEGG: alpha-amylase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3619 Superoxide dismutase [Fe] (EC 1.15.1.1) no 0.57
    2 GFF3963 Additional substrate-specific component CbiN of cobalt ECF transporter no 0.54
    3 GFF2444 FIG00923183: possible membrane protein YebY no 0.47
    4 GFF4258 Ferrichrome-iron receptor no 0.46
    5 GFF4727 Manganese ABC transporter, periplasmic-binding protein SitA no 0.45
    6 GFF4808 CRISPR-associated protein, Cas2 no 0.45
    7 GFF2873 hypothetical protein no 0.44
    8 GFF788 ATP-dependent RNA helicase YejH no 0.44
    9 GFF2189 Nitrate/nitrite sensor protein (EC 2.7.3.-) 0.56 0.44
    10 GFF3838 Putative nucleoside transporter YegT 0.13 0.43
    11 GFF1109 Putative LysR family transcriptional regulator no 0.43
    12 GFF4527 Citrate lyase alpha chain (EC 4.1.3.6) no 0.43
    13 GFF2445 Stationary phase inducible protein CsiE no 0.42
    14 GFF3272 Putative two component system histidine kinase YedV no 0.42
    15 GFF825 RNA-binding protein Hfq no 0.41
    16 GFF3364 Flagellar hook-associated protein FlgL no 0.41
    17 GFF2286 Melibiose carrier protein, Na+/melibiose symporter no 0.41
    18 GFF1042 FIG00638118: hypothetical protein no 0.41
    19 GFF568 FIG00553873: hypothetical protein no 0.40
    20 GFF3304 Phosphate starvation-inducible protein PhoH, predicted ATPase no 0.40

    Or look for negative cofitness