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  • Top cofit genes for GFF4022 from Variovorax sp. SCN45

    UPF0060 membrane protein YnfA
    SEED: Protein of unknown function UPF0060

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3753 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.55
    2 GFF2103 Regulatory protein, LuxR:Tetratricopeptide TPR_4 0.46 0.52
    3 GFF7322 hypothetical protein no 0.52
    4 GFF7075 no description no 0.49
    5 GFF5206 Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30) no 0.49
    6 GFF7323 Transcriptional response regulatory protein GlrR 0.21 0.49
    7 GFF6627 Mobile element protein no 0.47
    8 GFF5233 General secretion pathway protein F / Type II secretory pathway, component PulF 0.48 0.47
    9 GFF5999 DNA polymerase IV (EC 2.7.7.7) no 0.46
    10 GFF804 Fumarylacetoacetate hydrolase family protein no 0.46
    11 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.46
    12 GFF2195 FIG00732904: hypothetical protein no 0.46
    13 GFF4067 FIG00897050: hypothetical protein no 0.45
    14 GFF5529 Putative outer membrane protein no 0.45
    15 GFF2752 FIG00974677: hypothetical protein 0.60 0.45
    16 GFF4935 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) 0.38 0.45
    17 GFF95 hypothetical protein no 0.45
    18 GFF4407 Alkan-1-ol dehydrogenase, PQQ-dependent (EC 1.1.99.20) no 0.44
    19 GFF7410 no description 0.35 0.43
    20 GFF3595 no description no 0.43

    Or look for negative cofitness