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  • Top cofit genes for PS417_20580 from Pseudomonas simiae WCS417

    isocitrate dehydrogenase
    SEED: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
    KEGG: isocitrate dehydrogenase kinase/phosphatase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_23730 LysR family transcriptional regulator 0.89 0.59
    2 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) 0.41 0.53
    3 PS417_10535 hypothetical protein 0.83 0.50
    4 PS417_25705 lipoate--protein ligase 0.56 0.48
    5 PS417_21750 acetyl-CoA synthetase 0.98 0.46
    6 PS417_12665 hypothetical protein no 0.45
    7 PS417_16570 isocitrate lyase 0.94 0.44
    8 PS417_23725 methylmalonate-semialdehyde dehydrogenase 0.90 0.44
    9 PS417_01180 ribosomal protein S6 modification protein 0.76 0.43
    10 PS417_17560 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) 0.87 0.43
    11 PS417_13840 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.31 0.41
    12 PS417_21275 GntR family transcriptional regulator no 0.40
    13 PS417_17545 2-oxoisovalerate dehydrogenase 0.96 0.39
    14 PS417_17565 branched-chain amino acid aminotransferase 0.51 0.37
    15 PS417_26040 malate synthase 0.99 0.36
    16 PS417_21065 3-methylitaconate isomerase 0.89 0.34
    17 PS417_07995 LOG family protein 0.41 0.34
    18 PS417_19965 histidine kinase 0.88 0.33
    19 PS417_15935 Rrf2 family transcriptional regulator no 0.33
    20 PS417_05840 LuxR family transcriptional regulator no 0.32

    Or look for negative cofitness