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Cofit
Protein
Homologs
Top cofit genes for GFF401 from
Variovorax sp. SCN45
PhbF
SEED: PhbF
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3583
AMP nucleosidase (EC 3.2.2.4)
0.55
0.92
2
GFF6151
Transcriptional regulator, LysR family
no
0.90
3
GFF936
Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3)
no
0.90
4
GFF902
Transcriptional regulator, AsnC family
no
0.90
5
GFF2818
Phosphoenolpyruvate synthase (EC 2.7.9.2)
no
0.90
6
GFF934
Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3)
no
0.89
7
GFF6127
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
no
0.89
8
GFF903
Acetolactate synthase large subunit (EC 2.2.1.6)
no
0.89
9
GFF3660
integral membrane sensor signal transduction histidine kinase
no
0.89
10
GFF6150
Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
no
0.89
11
GFF4592
Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4)
0.42
0.89
12
GFF1322
[Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme
0.78
0.89
13
GFF1167
Predicted Lactate-responsive regulator, IclR family
0.59
0.89
14
GFF343
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
0.77
0.88
15
GFF2843
Murein hydrolase activator NlpD
no
0.88
16
GFF2307
Heme O synthase, protoheme IX farnesyltransferase, COX10-CtaB
0.80
0.88
17
GFF5677
Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
no
0.88
18
GFF559
FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
0.44
0.88
19
GFF5041
Malonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.18)
0.51
0.88
20
GFF6770
2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
0.78
0.88
Or look for
negative cofitness