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  • Top cofit genes for PS417_20535 from Pseudomonas simiae WCS417

    peptidylprolyl isomerase
    SEED: Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8)
    KEGG: peptidyl-prolyl cis-trans isomerase A (cyclophilin A)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17460 Quinoprotein ethanol dehydrogenase QedA (EC 1.1.2.8) (from data) 0.59 0.30
    2 PS417_17475 histidine kinase no 0.30
    3 PS417_17420 ethanol oxidation regulatory protein ercA (from data) 0.42 0.27
    4 PS417_19965 histidine kinase 0.21 0.26
    5 PS417_21750 acetyl-CoA synthetase 0.39 0.24
    6 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE 0.56 0.24
    7 PS417_24320 large-conductance mechanosensitive channel 0.36 0.22
    8 PS417_24550 ATP-dependent helicase 0.61 0.22
    9 PS417_26040 malate synthase 0.35 0.22
    10 PS417_03160 metal ABC transporter ATPase 0.61 0.22
    11 PS417_17495 multidrug ABC transporter permease 0.47 0.22
    12 PS417_05200 DNA recombination protein RecO 0.19 0.21
    13 PS417_24305 DNA repair protein RadA 0.35 0.21
    14 PS417_15115 exonuclease SbcD 0.45 0.21
    15 PS417_11930 hypothetical protein no 0.21
    16 PS417_17490 ABC transporter ATP-binding protein no 0.21
    17 PS417_16570 isocitrate lyase no 0.21
    18 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC 0.11 0.20
    19 PS417_17500 sulfurtransferase 0.53 0.20
    20 PS417_13170 multidrug DMT transporter permease no 0.20

    Or look for negative cofitness