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  • Top cofit genes for GFF4008 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Chromosome initiation inhibitor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3908 FIG00582414: hypothetical protein no 0.55
    2 GFF3655 no description no 0.55
    3 GFF2630 Ligand-binding SRPBCC domain protein family no 0.54
    4 GFF3468 Nucleoside-diphosphate-sugar epimerases no 0.53
    5 GFF1929 Transcriptional regulator, AraC family no 0.53
    6 GFF6684 ABC transporter, ATP-binding protein no 0.51
    7 GFF1709 no description no 0.51
    8 GFF5240 General secretion pathway protein K 0.37 0.51
    9 GFF6184 hypothetical protein no 0.51
    10 GFF2232 Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) no 0.51
    11 GFF4603 Short-chain dehydrogenase, associated with 2-hydroxychromene-2-carboxylate isomerase family protein no 0.50
    12 GFF4290 MaoC-like dehydratase no 0.50
    13 GFF4812 no description no 0.50
    14 GFF864 no description no 0.50
    15 GFF2952 Arsenic resistance protein ArsH no 0.49
    16 GFF5976 Transcriptional regulator, AraC family no 0.49
    17 GFF6766 MATE efflux family protein no 0.49
    18 GFF2605 Tricarboxylate transport sensor protein TctE no 0.49
    19 GFF6094 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) no 0.49
    20 GFF6364 VgrG protein no 0.48

    Or look for negative cofitness