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Cofit
Protein
Homologs
Top cofit genes for GFF4003 from
Variovorax sp. SCN45
FIGfam005179
SEED: FIGfam005179
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF786
Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system
no
0.57
2
GFF320
RNA polymerase ECF-type sigma factor
no
0.56
3
GFF504
SAM-dependent methyltransferases
no
0.55
4
GFF5683
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.55
5
GFF6593
Alcohol dehydrogenase (EC 1.1.1.1)
no
0.55
6
GFF1666
N-methylhydantoinase A (EC 3.5.2.14)
no
0.54
7
GFF3006
hypothetical protein
no
0.53
8
GFF5325
3-dehydroquinate synthase (EC 4.2.3.4)
no
0.52
9
GFF2902
ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes)
no
0.52
10
GFF4389
Type IV secretory pathway, VirD2 components (relaxase)
no
0.52
11
GFF5668
Uncharacterized MFS-type transporter
no
0.51
12
GFF1986
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.51
13
GFF5428
YaeQ protein
no
0.51
14
GFF4676
hypothetical protein
no
0.50
15
GFF2278
ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.50
16
GFF6624
hypothetical protein
no
0.50
17
GFF255
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)
no
0.50
18
GFF770
Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196)
no
0.50
19
GFF2752
FIG00974677: hypothetical protein
no
0.49
20
GFF622
BUG/TctC family periplasmic protein
no
0.49
Or look for
negative cofitness