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  • Top cofit genes for GFF400 from Variovorax sp. SCN45

    Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4)
    SEED: Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
    KEGG: ribosomal protein S12 methylthiotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6324 Kup system potassium uptake protein 0.64 0.66
    2 GFF151 FIG00460174: hypothetical protein no 0.62
    3 GFF3366 Septum site-determining protein MinD 0.57 0.61
    4 GFF4188 Signal peptidase I (EC 3.4.21.89) no 0.60
    5 GFF2354 FIG00555615: hypothetical protein no 0.60
    6 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) 0.67 0.59
    7 GFF167 Two-component system sensor histidine kinase 0.35 0.58
    8 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) 0.30 0.57
    9 GFF5274 Various polyols ABC transporter, permease protein 2 0.35 0.56
    10 GFF5080 DNA recombination-dependent growth factor RdgC 0.44 0.56
    11 GFF5664 hypothetical protein no 0.55
    12 GFF551 Uncharacterized protein Tbd_1903 no 0.54
    13 GFF2984 Adenosine deaminase (EC 3.5.4.4) no 0.54
    14 GFF2505 hypothetical protein no 0.53
    15 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.41 0.53
    16 GFF531 hypothetical protein no 0.53
    17 GFF6328 LPS-assembly lipoprotein LptE no 0.53
    18 GFF6251 hypothetical protein no 0.53
    19 GFF1107 NAD(FAD)-utilizing dehydrogenases 0.58 0.53
    20 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) 0.71 0.53

    Or look for negative cofitness