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  • Top cofit genes for GFF40 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.62
    2 GFF3710 Lactoylglutathione lyase and related lyases no 0.59
    3 GFF3659 Two-component transcriptional response regulator, OmpR family no 0.58
    4 GFF4849 Conjugative transfer protein TrbB no 0.58
    5 GFF10 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.58
    6 GFF5029 Transcriptional regulator, IclR family no 0.56
    7 GFF7171 Transcriptional regulator DmlR, LysR family no 0.56
    8 GFF6207 Allantoin racemase (EC 5.1.99.3) no 0.55
    9 GFF773 hypothetical protein no 0.55
    10 GFF1533 no description no 0.54
    11 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.54
    12 GFF2074 hypothetical protein no 0.53
    13 GFF5426 Phosphoenolpyruvate synthase (EC 2.7.9.2) no 0.52
    14 GFF1508 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.52
    15 GFF3177 hypothetical protein no 0.52
    16 GFF4192 no description no 0.51
    17 GFF2225 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.51
    18 GFF1769 Urease accessory protein UreD no 0.51
    19 GFF3574 hypothetical protein no 0.51
    20 GFF2483 Urease alpha subunit (EC 3.5.1.5) no 0.50

    Or look for negative cofitness