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  • Top cofit genes for GFF4 from Variovorax sp. SCN45

    VapC toxin protein
    SEED: VapC toxin protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5981 COGs COG3558 no 0.60
    2 GFF4994 Acyl-CoA-binding protein no 0.59
    3 GFF468 Transcriptional regulator, LysR family no 0.58
    4 GFF1409 hypothetical protein no 0.54
    5 GFF2556 UPF0337 family protein no 0.52
    6 GFF2221 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.51
    7 GFF7060 BUG/TctC family periplasmic protein no 0.51
    8 GFF3050 Lactam utilization protein LamB no 0.51
    9 GFF2332 Transcriptional regulator, LysR family no 0.50
    10 GFF1487 Tetrapartite efflux system component, FusD-like no 0.50
    11 GFF2847 histone-like nucleoid-structuring protein H-NS no 0.50
    12 GFF6921 no description no 0.49
    13 GFF2302 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) no 0.49
    14 GFF1058 Pyrimidine ABC transporter, substrate-binding component no 0.48
    15 GFF2466 no description no 0.48
    16 GFF745 BUG/TctC family periplasmic protein no 0.48
    17 GFF1366 Uncharacterized MFS-type transporter no 0.48
    18 GFF1713 no description no 0.48
    19 GFF3959 Uncharacterized integral membrane endopeptidase Bmul_2226 no 0.47
    20 GFF5299 TonB-dependent receptor no 0.47

    Or look for negative cofitness