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Cofit
Protein
Homologs
Top cofit genes for GFF4 from
Variovorax sp. SCN45
VapC toxin protein
SEED: VapC toxin protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5981
COGs COG3558
no
0.60
2
GFF4994
Acyl-CoA-binding protein
no
0.59
3
GFF468
Transcriptional regulator, LysR family
no
0.58
4
GFF1409
hypothetical protein
no
0.54
5
GFF2556
UPF0337 family protein
no
0.52
6
GFF2221
ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.51
7
GFF7060
BUG/TctC family periplasmic protein
no
0.51
8
GFF3050
Lactam utilization protein LamB
no
0.51
9
GFF2332
Transcriptional regulator, LysR family
no
0.50
10
GFF1487
Tetrapartite efflux system component, FusD-like
no
0.50
11
GFF2847
histone-like nucleoid-structuring protein H-NS
no
0.50
12
GFF6921
no description
no
0.49
13
GFF2302
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
no
0.49
14
GFF1058
Pyrimidine ABC transporter, substrate-binding component
no
0.48
15
GFF2466
no description
no
0.48
16
GFF745
BUG/TctC family periplasmic protein
no
0.48
17
GFF1366
Uncharacterized MFS-type transporter
no
0.48
18
GFF1713
no description
no
0.48
19
GFF3959
Uncharacterized integral membrane endopeptidase Bmul_2226
no
0.47
20
GFF5299
TonB-dependent receptor
no
0.47
Or look for
negative cofitness