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  • Top cofit genes for GFF3997 from Variovorax sp. SCN45

    Short-chain dehydrogenase/reductase SDR
    SEED: Short-chain dehydrogenase/reductase SDR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6937 Membrane protein no 0.55
    2 GFF3393 Benzoate ABC transporter, ATP-binding protein 2 no 0.55
    3 GFF2483 Urease alpha subunit (EC 3.5.1.5) 0.25 0.55
    4 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.54
    5 GFF4255 no description no 0.53
    6 GFF4849 Conjugative transfer protein TrbB no 0.50
    7 GFF3231 hypothetical protein no 0.50
    8 GFF3769 FIG022979: MoxR-like ATPases no 0.48
    9 GFF5922 T6SS forkhead associated domain protein ImpI/VasC no 0.48
    10 GFF1896 Two-component transcriptional response regulator, LuxR family no 0.47
    11 GFF2408 FIG00976241: hypothetical protein no 0.47
    12 GFF5747 Flagellum-specific ATP synthase FliI no 0.47
    13 GFF2372 Similar to citrate lyase beta chain, 3 no 0.47
    14 GFF4363 Chromosome initiation inhibitor no 0.47
    15 GFF6207 Allantoin racemase (EC 5.1.99.3) no 0.47
    16 GFF62 hypothetical protein no 0.45
    17 GFF6143 2-aminoethylphosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) no 0.45
    18 GFF5687 FIG01027591: hypothetical protein no 0.45
    19 GFF40 no description no 0.45
    20 GFF4940 FIG033889: YebC paralog in Betaproteobacteria no 0.44

    Or look for negative cofitness