Top cofit genes for GFF3989 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Error-prone, lesion bypass DNA polymerase V (UmuC)
SEED: Error-prone, lesion bypass DNA polymerase V (UmuC)
KEGG: DNA polymerase V

Rank Hit Name Description Conserved? Cofitness  
1 GFF4510 Co-activator of prophage gene expression IbrA no 0.58
2 GFF4560 Propionate catabolism operon regulatory protein PrpR no 0.58
3 GFF1587 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) no 0.53
4 GFF1708 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) no 0.52
5 GFF1554 Putative transcriptional regulator no 0.52
6 GFF4337 FIG001943: hypothetical protein YajQ no 0.50
7 GFF2358 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) no 0.50
8 GFF3053 Twitching motility protein PilT no 0.50
9 GFF1758 Putative LysR family transcriptional regulator no 0.48
10 GFF4581 Putative inner membrane protein no 0.48
11 GFF3543 Electron transfer flavoprotein, alpha subunit no 0.48
12 GFF3881 Colanic acid biosynthsis UDP-glucose lipid carrier transferase WcaJ no 0.47
13 GFF1272 Phage holin no 0.47
14 GFF1923 FIG074102: hypothetical protein no 0.47
15 GFF2974 Outer membrane stress sensor protease DegQ, serine protease no 0.46
16 GFF3347 Protein of unknown function YceH no 0.46
17 GFF371 DNA repair protein RadC 0.53 0.46
18 GFF3946 Propanediol utilization polyhedral body protein PduB no 0.45
19 GFF1181 IncF plasmid conjugative transfer pilus assembly protein TraH no 0.45
20 GFF691 ABC transport system, permease component YbhR 0.28 0.45

Or look for negative cofitness