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  • Top cofit genes for GFF3987 from Variovorax sp. SCN45

    3-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
    SEED: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2225 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.57
    2 GFF5957 Uncharacterized MFS-type transporter no 0.57
    3 GFF184 Adenylate cyclase (EC 4.6.1.1) no 0.55
    4 GFF6216 hypothetical protein no 0.52
    5 GFF498 Squalene/phytoene desaturase HopC no 0.52
    6 GFF1881 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit (EC 1.2.7.-) / 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit (EC 1.2.7.-) no 0.51
    7 GFF6020 UPF0246 protein YaaA no 0.51
    8 GFF4647 no description no 0.50
    9 GFF5064 Exonuclease SbcC no 0.49
    10 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B no 0.49
    11 GFF1880 Previously called glutamate synthase [NADPH] small chain no 0.49
    12 GFF968 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) no 0.48
    13 GFF6905 Chloride channel protein 0.26 0.48
    14 GFF4255 no description 0.22 0.47
    15 GFF4815 Glucose-fructose oxidoreductase (EC 1.1.99.28) no 0.47
    16 GFF5870 hypothetical protein no 0.47
    17 GFF4503 RNA polymerase sigma factor no 0.47
    18 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) no 0.47
    19 GFF4730 hypothetical protein no 0.46
    20 GFF5868 hypothetical protein no 0.46

    Or look for negative cofitness