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  • Top cofit genes for GFF3986 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
    KEGG: 3-oxoacyl-[acyl-carrier protein] reductase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1782 integral membrane sensor signal transduction histidine kinase no 0.61
    2 GFF101 Phosphate-binding DING protein (related to PstS) no 0.58
    3 GFF4494 hypothetical protein no 0.57
    4 GFF7326 Integrase no 0.57
    5 GFF4825 SWIB/MDM2 domain-containing proteins no 0.57
    6 GFF2097 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) no 0.56
    7 GFF5819 no description no 0.55
    8 GFF1366 Uncharacterized MFS-type transporter no 0.55
    9 GFF7115 hypothetical protein no 0.55
    10 GFF1401 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.54
    11 GFF3414 Fumarylacetoacetase (EC 3.7.1.2) no 0.53
    12 GFF2640 PKHD-type hydroxylase YbiX no 0.53
    13 GFF1873 KEGG: LacI family transcriptional regulator no 0.53
    14 GFF2813 LSU ribosomal protein L9p no 0.52
    15 GFF5003 FIG00348156: hypothetical protein no 0.51
    16 GFF2073 Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) no 0.51
    17 GFF7363 hypothetical protein no 0.51
    18 GFF6195 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.51
    19 GFF4844 Conjugative transfer protein TrbL no 0.51
    20 GFF446 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) no 0.51

    Or look for negative cofitness