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  • Top cofit genes for GFF3980 from Variovorax sp. SCN45

    3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-)
    SEED: 3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6332 Maltodextrin glucosidase (EC 3.2.1.20) no 0.54
    2 GFF480 Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1) no 0.52
    3 GFF7051 hypothetical protein no 0.52
    4 GFF6243 Ku domain protein no 0.50
    5 GFF330 Nucleoside ABC transporter, permease protein 1 no 0.50
    6 GFF2547 Type I antifreeze protein no 0.50
    7 GFF5135 DNA repair exonuclease family protein YhaO no 0.50
    8 GFF2734 DNA topoisomerase IV subunit B (EC 5.99.1.3) no 0.50
    9 GFF499 hypothetical protein no 0.49
    10 GFF5781 Transcriptional regulator, LysR family no 0.49
    11 GFF7 no description no 0.48
    12 GFF6219 hypothetical protein no 0.48
    13 GFF6146 Phosphonoacetate hydrolase (EC 3.11.1.2) no 0.47
    14 GFF2630 Ligand-binding SRPBCC domain protein family no 0.47
    15 GFF5776 Gluconokinase (EC 2.7.1.12) no 0.47
    16 GFF482 Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) no 0.47
    17 GFF6843 FIG00958542: hypothetical protein no 0.47
    18 GFF6526 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) no 0.47
    19 GFF1406 hypothetical protein no 0.47
    20 GFF5572 FIG00984604: hypothetical protein no 0.47

    Or look for negative cofitness