Top cofit genes for GFF3978 from Variovorax sp. SCN45

ABC-type branched-chain amino acid transport systems, periplasmic component
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF4719		hypothetical protein	no	0.66
2	GFF3133		hypothetical protein	no	0.65
3	GFF2650		hypothetical protein	no	0.63
4	GFF2248		Transcriptional regulatory protein RtcR	no	0.62
5	GFF5440		RNA polymerase ECF-type sigma factor	0.24	0.62
6	GFF5071		AmpG permease	no	0.62
7	GFF4215		L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ	no	0.61
8	GFF5805		Putative transmembrane protein	no	0.60
9	GFF2219		FIG00454641: hypothetical protein	no	0.59
10	GFF3267		RNA-binding protein	no	0.59
11	GFF1346		hypothetical protein	no	0.59
12	GFF3958		Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)	no	0.59
13	GFF17		hypothetical protein	no	0.57
14	GFF3485		Ferredoxin, 2Fe-2S	no	0.57
15	GFF1305		ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)	no	0.56
16	GFF4581		hypothetical protein	no	0.56
17	GFF7183		hypothetical protein	no	0.56
18	GFF1914		Guanine deaminase (EC 3.5.4.3)	no	0.56
19	GFF5955		Transcriptional regulator, LysR family	no	0.54
20	GFF5097		5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)	no	0.54

Or look for negative cofitness