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  • Top cofit genes for GFF3974 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: Oxidoreductase, short chain dehydrogenase/reductase family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1159 Acetolactate synthase small subunit (EC 2.2.1.6) no 0.75
    2 GFF829 Aerobic cobaltochelatase CobN subunit (EC 6.6.1.2) no 0.75
    3 GFF945 Excinuclease ABC subunit B no 0.73
    4 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX no 0.73
    5 GFF3127 no description no 0.71
    6 GFF6040 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent no 0.71
    7 GFF5984 L-lactate dehydrogenase no 0.70
    8 GFF6129 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) no 0.70
    9 GFF6862 Two-component system sensor histidine kinase no 0.70
    10 GFF2 Transcription accessory protein (S1 RNA-binding domain) no 0.69
    11 GFF3406 Benzoyl-CoA oxygenase component A no 0.69
    12 GFF3867 Translation elongation factor LepA no 0.69
    13 GFF3583 AMP nucleosidase (EC 3.2.2.4) no 0.68
    14 GFF3660 integral membrane sensor signal transduction histidine kinase no 0.68
    15 GFF2357 DNA repair protein RecN no 0.68
    16 GFF2844 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) no 0.68
    17 GFF6087 Transcriptional regulator, AcrR family no 0.68
    18 GFF1589 FIG00765372: hypothetical protein no 0.68
    19 GFF213 tmRNA-binding protein SmpB no 0.68
    20 GFF2307 Heme O synthase, protoheme IX farnesyltransferase, COX10-CtaB no 0.68

    Or look for negative cofitness