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  • Top cofit genes for GFF3972 from Variovorax sp. SCN45

    Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7109 BUG/TctC family periplasmic protein no 0.53
    2 GFF3774 hypothetical protein no 0.49
    3 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase 0.32 0.48
    4 GFF1340 ABC transporter, ATP-binding protein 1 RSc1753 no 0.47
    5 GFF1111 probable membrane protein NMA1176 no 0.46
    6 GFF6486 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) no 0.46
    7 GFF5271 Transcriptional regulator, LysR family no 0.45
    8 GFF3270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) no 0.45
    9 GFF5433 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.45
    10 GFF3567 YihE protein, required for LPS synthesis no 0.45
    11 GFF6657 Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system no 0.45
    12 GFF4902 hypothetical protein no 0.44
    13 GFF849 putative carboxylesterase no 0.44
    14 GFF5260 Uncharacterized protein ygiD no 0.44
    15 GFF7167 Pirin no 0.44
    16 GFF6398 SH3, type 3 no 0.43
    17 GFF3989 PUTATIVE 4-HYDROXYBENZOYL-COA THIOESTERASE PROTEIN( EC:3.1.2.23 ) no 0.43
    18 GFF279 Uncharacterized MFS-type transporter no 0.43
    19 GFF6576 Conjugative transfer protein TrbE no 0.43
    20 GFF7068 hypothetical protein no 0.43

    Or look for negative cofitness