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  • Top cofit genes for GFF3970 from Variovorax sp. SCN45

    Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13)
    SEED: 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.57
    2 GFF4720 Putrescine transport system permease protein potI no 0.56
    3 GFF1963 Transcriptional regulator, AsnC family no 0.55
    4 GFF6005 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.54
    5 GFF6488 no description no 0.53
    6 GFF5353 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.53
    7 GFF1352 Probable glutathione s-transferase protein (EC 2.5.1.18) no 0.52
    8 GFF4217 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.52
    9 GFF5680 Phosphoglycolate phosphatase (EC 3.1.3.18) no 0.51
    10 GFF1160 hypothetical protein no 0.50
    11 GFF7373 CaiB/BaiF family protein no 0.50
    12 GFF2637 no description no 0.49
    13 GFF356 L-asparaginase (EC 3.5.1.1) no 0.49
    14 GFF1791 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.49
    15 GFF2147 no description no 0.49
    16 GFF3362 Fatty acid desaturase no 0.48
    17 GFF4675 no description no 0.48
    18 GFF1292 Macrolide-specific efflux protein MacA no 0.48
    19 GFF3844 Transcriptional regulator, LysR family no 0.47
    20 GFF4787 ADP-ribosylglycohydrolase family protein no 0.47

    Or look for negative cofitness