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  • Top cofit genes for GFF3968 from Variovorax sp. SCN45

    Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8)
    SEED: Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8)
    KEGG: indolepyruvate ferredoxin oxidoreductase, beta subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1963 Transcriptional regulator, AsnC family no 0.55
    2 GFF879 BUG/TctC family periplasmic protein no 0.52
    3 GFF5844 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A no 0.50
    4 GFF5655 Formate dehydrogenase formation protein FdhE no 0.50
    5 GFF6020 UPF0246 protein YaaA no 0.49
    6 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.48
    7 GFF7374 FIG00984748: hypothetical protein no 0.48
    8 GFF274 Probable RNA methyltransferase PA1839 no 0.47
    9 GFF6086 Putative short-chain dehydrogenase no 0.47
    10 GFF3380 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) no 0.47
    11 GFF7019 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.47
    12 GFF326 Polysaccharide deacetylase, caspase activity no 0.47
    13 GFF1055 Fumarylacetoacetate hydrolase family protein no 0.46
    14 GFF4799 hypothetical protein no 0.46
    15 GFF2438 Ferrichrome-iron receptor no 0.46
    16 GFF7373 CaiB/BaiF family protein no 0.46
    17 GFF1699 hypothetical protein no 0.46
    18 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) no 0.45
    19 GFF3704 FIG00536957: hypothetical protein no 0.45
    20 GFF4149 hypothetical protein no 0.44

    Or look for negative cofitness