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  • Top cofit genes for GFF3962 from Variovorax sp. SCN45

    Opine dehydrogenase (EC 1.5.1.28)
    SEED: Opine dehydrogenase (EC 1.5.1.28)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7299 MotA/TolQ/ExbB proton channel family protein no 0.63
    2 GFF1440 Multidomain signal transduction protein including CheB-like methylesterase, CheR-like methyltransferase and BaeS-like histidine kinase no 0.61
    3 GFF4252 hypothetical protein no 0.59
    4 GFF4390 Membrane-fusion protein no 0.58
    5 GFF6889 Alpha-aminoadipate aminotransferase (EC 2.6.1.39) @ Leucine transaminase (EC 2.6.1.6) @ Valine transaminase no 0.58
    6 GFF6147 Phosphonoacetaldehyde dehydrogenase (NAD+) no 0.56
    7 GFF4897 Probable ALANIN-rich signal peptide protein no 0.56
    8 GFF7268 BUG/TctC family periplasmic protein no 0.55
    9 GFF4377 putative plasmid stabilization protein no 0.55
    10 GFF5 FIG00537881: hypothetical protein no 0.55
    11 GFF6390 GtrA-like protein no 0.54
    12 GFF6341 no description no 0.54
    13 GFF5028 hypothetical protein no 0.54
    14 GFF1504 Alkylhydroperoxidase AhpD domain protein no 0.54
    15 GFF5957 Uncharacterized MFS-type transporter no 0.53
    16 GFF5902 probable membrane protein STY1534 no 0.52
    17 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B no 0.52
    18 GFF6262 Transcriptional regulator PhnF no 0.52
    19 GFF3458 Rubisco activation protein CbbQ no 0.52
    20 GFF1833 (S)-mandelate dehydrogenase (EC 1.1.99.31) no 0.52

    Or look for negative cofitness