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  • Top cofit genes for GFF3961 from Variovorax sp. SCN45

    ATP-dependent RNA helicase NGO0650
    SEED: ATP-dependent RNA helicase NGO0650

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5527 Asl0046 protein no 0.51
    2 GFF675 KEGG: 2'-5' RNA ligase no 0.47
    3 GFF4901 no description no 0.47
    4 GFF1596 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.46
    5 GFF2919 no description no 0.46
    6 GFF916 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) no 0.45
    7 GFF1727 no description no 0.45
    8 GFF2340 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.45
    9 GFF7048 hypothetical protein no 0.45
    10 GFF6730 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.45
    11 GFF6457 no description no 0.44
    12 GFF6890 Threonine efflux protein no 0.44
    13 GFF6926 MBL-fold metallo-hydrolase superfamily no 0.44
    14 GFF5970 Uncharacterized MFS-type transporter no 0.43
    15 GFF3809 Outer membrane receptor proteins, mostly Fe transport 0.49 0.42
    16 GFF4069 DNA-binding heavy metal response regulator no 0.42
    17 GFF6301 Pyruvate:Oxaloacetate transcarboxylase domain protein no 0.42
    18 GFF4157 hypothetical protein no 0.42
    19 GFF3199 Ser/Thr protein phosphatase family protein no 0.42
    20 GFF2749 hypothetical protein no 0.42

    Or look for negative cofitness